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July 22 - 26, ATLAS Institute, CU Boulder
During this summer workshop, you will:
This summer workshop will engage 25 PhD students* in digital microfluidic research, with the aim of bridging the gap between computer science and microbiology. We invite PhD students with diverse backgrounds (e.g., computer engineering, biology, microfluidics).

During the hands-on sessions, each student will build their own biochip, learn how to program it, and develop a bio-protocol for it. The students will work in groups and learn from each other how to collaborate and develop new ideas. Apart from the theoretical and hands-on sessions, the students will be involved in a “where would it lead” open discussion with the senior researchers; discussion meant to identify the current research challenges and the future directions of the field.

*we welcome applications from postdocs and undergrads as well
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Duke University
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UC Riverside
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CU Boulder
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University of Washington
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Open-Source Hardware Association
Ali Lashkaripour
Boston University
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Sci-bots Inc.
Nathan Seidle
SparkFunX
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day1_introductions
day3_dropbot (christian fobel)
example faculty application (mirela)
day1_personal_biochips (mirela alistar)
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how to get a faculty job (mirela)
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July 22 (Monday) - Bio-protocols
09:00 - 09:30 - Welcome by organisers (Mirela Alistar)
09:30 - 10:30 - Lightning talks participants (4 mins each)
== coffee break
11:00 - 12:00 - Lightning talks participants (4 mins each)
== lunch
13:30 - 14:30 - Biological applications on microfluidic biochips
14:30 - 16:30 - Hands-on: GFP cloning 1 (Mirela Alistar)
== coffee break
17:00 - 19:00 - Translate bio-protocol -> graph (on your own)
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09:30 - 10:30 - Fun and more at SparkFunX (Nathan Seidle, SparkFun)
== coffee break
11:00 - 12:00 - Open source hardware in universities & academia (Alicia Gibb, OSHWA)
== lunch
13:30 - 14:30 - Design a biochip cartridge (on your own)
14:30 - 16:30 - Hands-on: fabricate your biochip (Mirela Alistar)
== coffee break
17:00 - 18:00 - Hands-on: coat & test your biochip (Mirela Alistar)
== social event
July 24 (Wednesday) - Biochip programs
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== coffee break
11:00 - 12:00 - Microfluidic Design Automation (Ali Lashkaripour, Boston University)
== lunch
13:30 - 14:30 - Challenges in biochip research (open discussion)
14:30 - 16:00 - Building a research community (group work)
== outing in the mountains
July 25 (Thursday) - Biochip automation
09:30 -10:30 - Algorithms to automate bio-protocol execution on biochips (Philip Brisk, UC Riverside)
== coffee break
10:45 - 12:00 - Fault-tolerance in CAD tools for biochips (Krishnendu Chakrabarty, Duke University)
== lunch
13:00 - 14:30 - Combining Fluidics and Computation (Max Willsey, University of Washington)
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July 26 (Friday) - Future of biochips
10:30 - 12:00 - How to get a faculty position (Mirela Alistar)
== lunch
13:30 - 16:00 - visit SparkFun Electronics
== fly home
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Contact us if you have questions. Looking forward to having you in our workshop!

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Assistant Professor, CU Boulder
Coordinator of Living Matter Lab
Mark D. Gross
Professor, CU Boulder
Director of Atlas Institute